Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899344.1_cds_XP_016449309.1_43871
CDS Infomation

[gene=LOC107774326] [db_xref=GeneID:107774326] [protein=uncharacterized RNA methyltransferase BH0687] [protein_id=XP_016449309.1] [location=complement(join(3259..3366,3448..3578,4624..4790,4862..4977,5102..5257,5575..5683,7073..7182,14394..14552,15804..16046,16260..16667))] [gbkey=CDS]
Sequence

ATGGCGGCGACGGCTACCTTCAGCCTTCGCTCTCTACCCTCTAATCAATGGCTGCACAAA
CTCCGAACTCGAACAGCAACTGCATCAGTACGTTCACATTCATTCACTACTCTCGCTTCT
CTTTCCCCCGTTGAAGATACCGAGGACATTCAATTGAACGTAAATTCCAAGGAAATGGTA
CAGGAAACGGTTCCTAGTACTAGTAACAACAACAACAATGACAAGTCGAAGAAGCCTTAT
TTTCCAAAGCGAGGGCAAACATTAGAATTAGTATGTGAATCCCTTGCTTTTAAAGGAAAA
GGCGTTTGCAAAGTTGCTGACACTGGATTTGTACTCATGTGTGATCGAGCACTCCCTGGA
GAACGATTTATTGGCCGTGTCACTCGCAAAAGAGAGAATTATGCCGAGGTGAAGAAATTG
AAAACCTTAACACGGCATTTGGACTATGTTGAAGCACCGTGTGAACATGCTTCGCATTGT
GGAGGTTGCAAGACGCAGAGCTTGTCGTATGAAGCTCAGCTCAGGGCCAAGGAGCAACAA
GTGCGCGACCTGGTTGTACACGTGGGCAAGTTTTCTGATCGAGAGCCAGTATTTGCTGAT
GCTATGAAACCCATTGTTCCTTGTGATATCCAATTTCACTATAGGAATAAGATGGAGTTC
TCGTTTGGCGCAAAGGGCTGGGTACCTGCTGAACAATTGCAAGACGATACAGAGGGCTCT
CGCTATGCTTTGGGTCTGCATGCCCCTGGCTGTTTTGATAAGATTTTAAATGTGAATAAG
TGCTTACTGCAAAGTGATTCCGGCAATGAGGTTCTTGAAGCTGTGCAAGGATGCTGGCGG
GATCCAGAACTGGGACTTTCTCCATATGATGTGCACTCTCACTCTGGGTTTCTGAAGCAT
CTAATGCTTAGAACAGGCAGGAATGTTGAAACTGGTCTTCCTGAGCTTATGGTTAATTTT
GTGACTTCTTCTTACAATCCTGAATGCTTGAGGCCCATTGTTGAGAAAATCGCAGCTATT
CCTGAAGTGGTAAGCATTGTTAACAATGTGAACACTTCTATCGGCAACACATCCGTTGGG
GAGAAGGAATATACATTGTATGGAAAATCTACCATTACAGAGATTCTAAGAGGGCTTACT
TTCCAAATATCAGCTAACTCTTTCTTTCAGACAAATACACACCAGGCAGAGATTCTCTAT
AAACTAATTGAGGATTGCGCCTTTCTTAAAGGAGATGGCTCTGAAATTGTTCTTGACTTA
TTTTGTGGGACAGGAACCATTGGCCTTACACTGGCCAAAAGGGTGAAGCATGTTTATGGT
TTTGAAGTAGTTGCTCAAGCTGTCTCTGATGCACGTCAGAATGCCAAGTTAAATTGCATT
GATAATGCAACTTTTATCGAAGGAGATCTGAATAAAATTGATTTGAACTTCGCCAGCAAC
TTGCCTACGCCGGATATTGTCATCACAGATCCTAATCGCCCTGGTATGCACATCAAATTG
ATCAATTTTTTGCTAAAGTTAAAGGCAACACGCATTGTTTATGTATCATGTAATCCTGCC
ACCTGTGCTCGTGATCTTAATTACCTCTGTTATGGTGTGCCAGAGCAGAATATAGAAGGC
CATTACAGGCTGAGTAGCTTACAACCAGTTGACATGTTTCCACACACACCTCATATTGAA
TGTGTTTGCTTGCTTGAGCTTCGGTGA

Peptide Sequence

PEP ID

XP_016449309.1
PEP Infomation

PREDICTED: uncharacterized RNA methyltransferase BH0687 [Nicotiana tabacum]
Sequence

MAATATFSLRSLPSNQWLHKLRTRTATASVRSHSFTTLASLSPVEDTEDIQLNVNSKEMV
QETVPSTSNNNNNDKSKKPYFPKRGQTLELVCESLAFKGKGVCKVADTGFVLMCDRALPG
ERFIGRVTRKRENYAEVKKLKTLTRHLDYVEAPCEHASHCGGCKTQSLSYEAQLRAKEQQ
VRDLVVHVGKFSDREPVFADAMKPIVPCDIQFHYRNKMEFSFGAKGWVPAEQLQDDTEGS
RYALGLHAPGCFDKILNVNKCLLQSDSGNEVLEAVQGCWRDPELGLSPYDVHSHSGFLKH
LMLRTGRNVETGLPELMVNFVTSSYNPECLRPIVEKIAAIPEVVSIVNNVNTSIGNTSVG
EKEYTLYGKSTITEILRGLTFQISANSFFQTNTHQAEILYKLIEDCAFLKGDGSEIVLDL
FCGTGTIGLTLAKRVKHVYGFEVVAQAVSDARQNAKLNCIDNATFIEGDLNKIDLNFASN
LPTPDIVITDPNRPGMHIKLINFLLKLKATRIVYVSCNPATCARDLNYLCYGVPEQNIEG
HYRLSSLQPVDMFPHTPHIECVCLLELR

Transcript Sequence

Gene sequence data has not been registered.